wrapper function to calculate absolute and relative abundance

wrapper function to calculate absolute and relative abundance

Usage

abundanceTbl(object, row_var, col_var, dir_output = ".")

Arguments

object

Seurat object

row_var

variable in meta data that will represent the rows

col_var

variable in meta data that will represent the columns

dir_output

target directory to save the results (default: .)

Examples

library(Seurat)
abundanceTbl(pbmc_small, row_var = "groups", col_var = "letter.idents")
unlink("abundance_tbl_pbmc_small_letter.idents.xlsx")