enrichr plot

plot enrichr results in a bar plot

Usage

plotEnrichr(filename, sheet, width, height, dir_input = ".", dir_output = ".")

Arguments

filename

name of .xlsx file without extension and without enrichr_

sheet

name of the excel sheet

width

width of output plot

height

height of output plot

dir_input

directory where the input file (.xlsx) is located (default: ".")

dir_output

directory to save the output plot (default: ".")

Value

create and save enrichr plot

Examples

enrichr_data_go <- data.frame(
  Term = c("Term1", "Term2", "Term3"),
  Adjusted.P.value = c(0.01, 0.02, 0.03),
  Overlap = c("5/100", "10/200", "15/300")
)
enrichr_data <- list("GO_Biological_Process_2021" = enrichr_data_go)
writexl::write_xlsx(enrichr_data, "./enrichr_test.xlsx")
plotEnrichr(
  filename = "test",
  sheet = "GO_Biological_Process_2021",
  width = 10,
  height = 5,
  dir_output = "."
)

unlink("enrichr_test.xlsx")
unlink("barplot_enrichr_test_GO_Biological_Process_2021.pdf")